31759 PRK09330
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31759 chr_2 PRK09330 813090 814882 + PRK09330

Synonyms

NCBI ID Ensembl Genomes exon ID
7446524 Thaps31759.2, Thaps31759.1, Thaps31759.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0207

Most Highly Correlated Transcripts

261400

NA
0.9329

261640

MFS
0.9227

16295

FBPase
0.9044

6693

hypothetical protein
0.9038

32226

CLPTM1 superfamily
0.903

23728

WD40 superfamily
0.9028

25068

hypothetical protein
0.9017

262363

hypothetical protein
0.9008

31598

cyclophilin superfamily
0.8999

264347

NDUFA9_like_SDR_a
0.8966

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in... cl10017 392.599 1.46E-133 227 - 522 specific 100021
Tubulin_FtsZ superfamily Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well... - 392.599 1.46E-133 227 - 522 superfamily 263945
PRK09330 cell division protein FtsZ; Validated - 416.86 7.36E-142 227 - 526 multi-dom 236468

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 309120

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 GO:0005737 GO:0003924 GO:0043234 GO:0051258 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0003924

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

GO:0043234

protein complex

Details: 
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.
GO Category: 
CC

GO:0051258

protein polymerization

Details: 
The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
GO Category: 
BP

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