37621 Ptr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37621 chr_15 Ptr 729292 731951 + Ptr

Synonyms

NCBI ID Ensembl Genomes exon ID
7450289 Thaps37621.4, Thaps37621.2, Thaps37621.3, Thaps37621.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0148

Most Highly Correlated Transcripts

10873

NA
0.9022

23952

hypothetical protein
0.9019

2587

O-FucT_like
0.9014

9148

hypothetical protein
0.8983

263051

ZntA
0.896

261357

NAD_binding_8 superfamily
0.8952

23904

hypothetical protein
0.8934

33287

(UBA2) Ube1
0.8927

12645

MYSc
0.8904

261056

(APB3) Adaptin_N
0.8903

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 105.085 6.74E-26 119 - 251 superfamily 250047
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 82.909 4.84E-18 298 - 487 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 82.909 4.84E-18 298 - 487 superfamily 253075
Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification,... - 468.007 9.49E-151 96 - 788 multi-dom 223956

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_267 PHATRDRAFT_267 176914 68953 Not available Cre09.g386113.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0004231 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004231

NA

Details: 
NA
GO Category: 
NA

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