3779 (NDK4) NDPk7B
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3779 chr_3 (NDK4) NDPk7B 1781208 1782398 + NDPk7B

Synonyms

NCBI ID Ensembl Genomes exon ID
7445329 Thaps3779.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0357

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0001
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.901

2047

hypothetical protein
0.8426

21014

hypothetical protein
0.7

bd879

(bd879) NA
0.6465

5777

PRO8NT
0.6426

11907

hypothetical protein
0.6293

bd1069

(bd1069) NA
0.6216

bd650

(bd650) NA
0.6156

7351

hypothetical protein
0.615

bd1658

(bd1658) NA
0.6144

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NDPk7B Nucleoside diphosphate kinase 7 domain B (NDPk7B): The nm23-H7 class of nucleoside diphosphate... cl00335 182.449 5.26E-56 244 - 383 specific 239875
NDPk superfamily Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of... - 182.449 5.26E-56 244 - 383 superfamily 260363
NDK Enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside... - 122.659 1.32E-33 243 - 385 multi-dom 197791

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 73699 Cre12.g558700.t1.2 Not available 318757

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004550 GO:0005524 GO:0006183 GO:0006228 GO:0006241 -

GO:0004550

nucleoside diphosphate kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006183

GTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.
GO Category: 
BP

GO:0006228

UTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.
GO Category: 
BP

GO:0006241

CTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.
GO Category: 
BP

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