4253 Dcp1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4253 chr_4 Dcp1 578847 579623 + Dcp1

Synonyms

NCBI ID Ensembl Genomes exon ID
7452607 Thaps4253.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0121
 0.36

Most Highly Correlated Transcripts

261400

NA
0.8714

bd870

(bd870) LRR_RI superfamily
0.8681

26991

GRX_GRXh_1_2_like
0.8577

37585

MECDP_synthase
0.8478

3071

NA
0.845

31829

CBS_like
0.8349

41655

Chloroa_b-bind
0.8286

2862

HA
0.817

9725

hypothetical protein
0.8141

36669

TPT
0.8058

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dcp1 mRNA decapping enzyme 1 (Dcp1); mRNA decapping enzyme 1 (Dcp1), together with Dcp2, is part of the... cl19045 171.173 1.60E-53 7 - 131 specific 197362
Dcp1 superfamily mRNA decapping enzyme 1 (Dcp1); mRNA decapping enzyme 1 (Dcp1), together with Dcp2, is part of the... - 171.173 1.60E-53 7 - 131 superfamily 267398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46257 PHATRDRAFT_46257 264872 216506 Not available Cre07.g339250.t1.2 AT1G08370.1 482317

KEGG

KEGG description KEGG Pathway
RNA degradation map03018

GO Terms

GO:0003923 GO:0016787 GO:0051336 -

GO:0003923

GPI-anchor transamidase activity

Details: 
Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.
GO Category: 
MF

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0051336

regulation of hydrolase activity

Details: 
Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
BP

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