42660 PLN02824
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42660 chr_17 PLN02824 324016 325727 - PLN02824

Synonyms

NCBI ID Ensembl Genomes exon ID
7444212 Thaps42660.2, Thaps42660.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0360

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

bd524

(bd524) NA
0.8383

bd1807

(bd1807) RRS1 superfamily
0.8171

plastidpF

0.7927

bd1806

(bd1806) AAT_I superfamily
0.7891

1440

hypothetical protein
0.7697

bd930

(bd930) HA
0.7596

262464

NrfG
0.7557

bd381

(bd381) NA
0.7548

37980

Mpv17_PMP22
0.7487

bd1667

(bd1667) Mpp10
0.7391

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02824 hydrolase, alpha/beta fold family protein - 256.204 3.57E-82 80 - 407 multi-dom 178419

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_25619 PHATR_25619 203916 163088 450954 Not available AT5G19850.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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