6585 MATH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6585 chr_6 MATH 1955082 1956303 - MATH

Synonyms

NCBI ID Ensembl Genomes exon ID
7446561 Thaps6585.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0146

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0175
 0.42

Most Highly Correlated Transcripts

1871

hypothetical protein
0.9262

9351

hypothetical protein
0.9166

21074

hypothetical protein
0.9013

3204

hypothetical protein
0.8998

10474

hypothetical protein
0.8944

8718

hypothetical protein
0.8849

7025

(Tp_Myb2R6) L-asparaginase_like superfamily
0.8835

6105

hypothetical protein
0.8825

6373

hypothetical protein
0.882

8445

hypothetical protein
0.8774

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... cl02446 63.167 3.13E-12 25 - 144 specific 238068
MATH superfamily MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-... - 63.167 3.13E-12 25 - 144 superfamily 261289

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 249532 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0003677 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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