PHATRDRAFT_107 leucine-rich repeat transmembrane protein (LRR_RI superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_107	chr_1	leucine-rich repeat transmembrane protein (LRR_RI superfamily)	1779747	1785992	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0373

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0234	0.45	69 19000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	49.6614	8.68E-07	3 - 164	superfamily	238064
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	35.5913	0.00502116	459 - 518	multi-dom	258126
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	35.5913	0.00502116	459 - 518	multi-dom	258126
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	35.5913	0.00502116	459 - 518	multi-dom	258126

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28795		Not available	Not available	Not available	Not available	Cre04.g216050.t1.1	AT5G63930.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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