PHATRDRAFT_10704 cyclin dependent kinase c (STKc_CDK9_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10704	chr_4	cyclin dependent kinase c (STKc_CDK9_like)	845979	847160	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0396

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0019	0.43	550 930

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
STKc_CDK9_like		Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases; Serine/...	cl09925	436.206	1.64E-153	8 - 309	specific	143345
PKc_like superfamily		Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the...	-	436.206	1.64E-153	8 - 309	superfamily	263920
S_TKc		Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-...	-	256.688	1.29E-83	8 - 309	multi-dom	214567

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33726		Not available	139626	147823	436308	Not available	AT5G64960.1	349530

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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