PHATRDRAFT_10805 (Beach)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_10805	chr_4	(Beach)	474408	475142	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0314

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0027	0.44	23000 100000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beach		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	cl10511	353.856	4.43E-123	3 - 245	specific	100117
Beach superfamily		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	-	353.856	4.43E-123	3 - 245	superfamily	263990

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
18378		Not available	203364	193804	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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