PHATRDRAFT_11197 nuclear pore complex component (sc seh1) (DUF2499)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11197	chr_5	nuclear pore complex component (sc seh1) (DUF2499)	192223	192501	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0180

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0169	0.42	430 6300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2499 superfamily		Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes...	-	109.985	1.58E-32	2 - 91	superfamily	256124
DUF2499 superfamily		Protein of unknown function (DUF2499); Members of this family are found in plants, lower eukaryotes...	-	109.985	1.58E-32	2 - 91	superfamily	256124

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
36091		Not available	165007	Not available	59791	Cre12.g555400.t1.2	AT4G22830.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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