PHATRDRAFT_11894 spb1_schpoet-dependent rrna methyltransferase spb1 (2-o-ribose rna methyltransferase) (s-adenosyl-l-methionine-dependent methyltransferase) (AdoMet_MTases)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_11894	chr_7	spb1_schpoet-dependent rrna methyltransferase spb1 (2-o-ribose rna methyltransferase) (s-adenosyl-l...	183290	183916	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0205

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0154	0.20	20000 42000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_MTases		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	cl17173	47.8099	6.93E-08	35 - 150	specific	100107
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	47.8099	6.93E-08	35 - 150	superfamily	266528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
17292		Not available	152790	118590	452635	Cre12.g529500.t1.2	AT4G25730.1	561340

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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