PHATRDRAFT_12043 at4g20760 f21c20_110 (carb_red_sniffer_like_SDR_c)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12043 chr_7 at4g20760 f21c20_110 (carb_red_sniffer_like_SDR_c) 900798 901671 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0030

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0014
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
carb_red_sniffer_like_SDR_c carbonyl reductase sniffer-like, classical (c) SDRs; Sniffer is an NADPH-dependent carbonyl... cl09931 211.385 1.68E-67 3 - 260 specific 187586
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 211.385 1.68E-67 3 - 260 superfamily 263925
adh_short short chain dehydrogenase; This family contains a wide variety of dehydrogenases. - 82.985 1.19E-19 3 - 192 multi-dom 249592

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
34730 Not available 278931 296974 77459 Not available AT4G20760.1 561779

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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