PHATRDRAFT_12538 related to ubiquitin fusion degradation protein 2 (U-box superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12538	chr_8	related to ubiquitin fusion degradation protein 2 (U-box superfamily)	681003	681251	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0192

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0104	0.29	81 81

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
U-box superfamily		U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding...	-	96.6112	1.39E-27	8 - 78	superfamily	266741

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28710		Not available	182511	318386	447692	Cre09.g398350.t1.2	AT5G15400.1	476181

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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