PHATRDRAFT_13001 nadph:protochlorophyllide oxidoreductase a (NADB_Rossmann superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13001	chr_10	nadph:protochlorophyllide oxidoreductase a (NADB_Rossmann superfamily)	355632	356531	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0067	0.34	150 810

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	366.724	4.17E-127	1 - 275	superfamily	263925
FabG		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [...	-	81.0173	1.94E-18	1 - 249	multi-dom	223959

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26759		Not available	188173	233711	113747	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments