PHATRDRAFT_13125 possible l-asparaginase ii (rSAM_SeCys)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13125 chr_10 possible l-asparaginase ii (rSAM_SeCys) 624469 625395 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0122

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0067
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 54.2617 4.36E-09 20 - 161 superfamily 100105
Radical_SAM superfamily Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and... - 54.2617 4.36E-09 20 - 161 superfamily 100105
DUF3641 superfamily Protein of unknown function (DUF3641); This domain family is found in bacteria and eukaryotes, and... - 210.026 9.05E-68 179 - 308 superfamily 256995
DUF3641 superfamily Protein of unknown function (DUF3641); This domain family is found in bacteria and eukaryotes, and... - 210.026 9.05E-68 179 - 308 superfamily 256995
rSAM_SeCys radical SAM/Cys-rich domain protein; Members of this protein family have an N-terminal radical SAM... - 495.882 1.85E-177 10 - 308 multi-dom 234488

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
28025 Not available 209318 241523 426735 Cre12.g561450.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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