PHATRDRAFT_13622 mgc83233 protein (RPN1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13622	chr_12	mgc83233 protein (RPN1)	392886	395722	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PC_rep superfamily		Proteasome/cyclosome repeat; Proteasome/cyclosome repeat.	-	36.2805	0.00460696	504 - 533	superfamily	250914
PC_rep superfamily		Proteasome/cyclosome repeat; Proteasome/cyclosome repeat.	-	36.2805	0.00460696	504 - 533	superfamily	250914
RPN1		26S proteasome regulatory complex component [Posttranslational modification, protein turnover,...	-	757.54	0	5 - 914	multi-dom	227441

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
26239		Not available	231541	201772	469845	Cre16.g676197.t1.1	AT2G20580.1	343670

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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