PHATRDRAFT_13682 rssa_soybn40s ribosomal protein sa (PTZ00254)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_13682 chr_12 rssa_soybn40s ribosomal protein sa (PTZ00254) 312182 312841 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it... cl00315 221.687 8.24E-73 21 - 187 specific 100106
RPS2 superfamily Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it... - 221.687 8.24E-73 21 - 187 superfamily 260347
PTZ00254 40S ribosomal protein SA; Provisional - 408.678 2.35E-145 5 - 220 multi-dom 240331

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21871 Not available 269442 196094 356503 Cre10.g432800.t1.2 AT1G72370.2 285573

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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