PHATRDRAFT_13791 y838_chlff upf0082 protein cf0838 (Transcrip_reg)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_13791	chr_12	y838_chlff upf0082 protein cf0838 (Transcrip_reg)	226488	227213	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0060

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0254	0.23	40000 14000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Transcrip_reg		Transcriptional regulator; This is a family of transcriptional regulators. In mammals, it activates...	cl00361	231.566	1.01E-75	3 - 239	specific	250810
Transcrip_reg superfamily		Transcriptional regulator; This is a family of transcriptional regulators. In mammals, it activates...	-	231.566	1.01E-75	3 - 239	superfamily	260382

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34698		Not available	Not available	247528	65618	Cre02.g097550.t1.2	AT2G25830.1	518692

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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