PHATRDRAFT_14177 neural precursor celldevelopmentally down-regulated 4 (HECTc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14177 chr_14 neural precursor celldevelopmentally down-regulated 4 (HECTc) 406470 407657 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0366

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0056
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... cl00077 368.816 8.95E-126 8 - 368 specific 238033
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 368.816 8.95E-126 8 - 368 superfamily 260176
HECTc Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2... - 334.973 7.58E-113 31 - 367 multi-dom 214523

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37231 Not available Not available 224760 Not available Not available Not available 358892

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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