PHATRDRAFT_14770 cytochrome c oxidase assembly factor (SCO)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_14770	chr_16	cytochrome c oxidase assembly factor (SCO)	689568	690083	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0349

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0148	0.35	0.0047 2600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SCO		SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1...	cl00388	167.01	9.08E-53	5 - 149	specific	239266
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	167.01	9.08E-53	5 - 149	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30986		Not available	270097	306338	239853	Cre17.g732850.t1.2	AT3G08950.1	362456

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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