PHATRDRAFT_14845 atp-dependent dnafamilyexpressed (recQ_fam)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_14845 chr_16 atp-dependent dnafamilyexpressed (recQ_fam) 198681 200000 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0199

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0122
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 105.398 2.54E-27 222 - 354 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 105.398 2.54E-27 222 - 354 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 81.6148 1.53E-18 36 - 192 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 81.6148 1.53E-18 36 - 192 superfamily 266587
recQ_fam ATP-dependent DNA helicase, RecQ family; All proteins in this family for which functions are known... - 389.129 5.49E-131 11 - 439 multi-dom 129701

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261829 Not available 157933 204581 Not available Cre12.g502350.t1.1 AT1G31360.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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