PHATRDRAFT_15481 (BING4CT)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15481 chr_19 (BING4CT) 352448 353896 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0209

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0047
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BING4CT BING4CT (NUC141) domain; This C terminal domain is found in the BING4 family of nucleolar WD40... cl06957 136.554 5.67E-39 300 - 382 specific 254632
BING4CT superfamily BING4CT (NUC141) domain; This C terminal domain is found in the BING4 family of nucleolar WD40... - 136.554 5.67E-39 300 - 382 superfamily 263112
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 89.3164 4.56E-20 103 - 291 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 73.5843 2.85E-14 97 - 335 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38662 Not available 149199 181060 100320 Cre12.g502800.t1.2 AT3G10530.1 538076

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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