PHATRDRAFT_15968 (PLN02906)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15968 chr_22 (PLN02906) 468103 472803 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0086

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0004
 0.65

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
fer2 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron... cl00159 44.6932 1.39E-05 1 - 64 specific 238126
fer2 superfamily 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron... - 44.6932 1.39E-05 1 - 64 superfamily 260226
Ald_Xan_dh_C2 superfamily Molybdopterin-binding domain of aldehyde dehydrogenase; Molybdopterin-binding domain of aldehyde... - 522.222 2.95E-170 724 - 1306 superfamily 251506
Ald_Xan_dh_C2 superfamily Molybdopterin-binding domain of aldehyde dehydrogenase; Molybdopterin-binding domain of aldehyde... - 522.222 2.95E-170 724 - 1306 superfamily 251506
FAD_binding_5 FAD binding domain in molybdopterin dehydrogenase; FAD binding domain in molybdopterin... cl19922 162.705 3.05E-45 244 - 431 specific 250245
FAD_binding_4 superfamily FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of... - 162.705 3.05E-45 244 - 431 superfamily 268275
Fer2_2 superfamily [2Fe-2S] binding domain; [2Fe-2S] binding domain. - 120.28 1.18E-31 65 - 139 superfamily 250876
Fer2_2 superfamily [2Fe-2S] binding domain; [2Fe-2S] binding domain. - 120.28 1.18E-31 65 - 139 superfamily 250876
CO_deh_flav_C CO dehydrogenase flavoprotein C-terminal domain; CO dehydrogenase flavoprotein C-terminal domain. cl08390 112.986 1.03E-28 441 - 545 specific 251962
CO_deh_flav_C superfamily CO dehydrogenase flavoprotein C-terminal domain; CO dehydrogenase flavoprotein C-terminal domain. - 112.986 1.03E-28 441 - 545 superfamily 263623

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
270071 Not available 209625 320566 50708 Cre12.g545101.t1.1 AT4G34900.1 295142

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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