PHATRDRAFT_16125 ribosomal protein l39 (Ribosomal_L39)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16125	chr_23	ribosomal protein l39 (Ribosomal_L39)	89467	89619	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0151

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0197	0.17	33 41000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_L39		Ribosomal L39 protein; Ribosomal L39 protein.	cl00952	49.5662	3.59E-10	8 - 50	specific	250163
Ribosomal_L39 superfamily		Ribosomal L39 protein; Ribosomal L39 protein.	-	49.5662	3.59E-10	8 - 50	superfamily	260717

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31796		Not available	272493	295963	68698	Not available	AT4G31985.1	289148

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments