PHATRDRAFT_16606 (COG1773)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16606	chr_27	(COG1773)	247796	248188	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0491

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0045	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rubredoxin		Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small...	cl00202	67.331	7.68E-16	31 - 83	specific	238372
rubredoxin_like superfamily		Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes...	-	67.331	7.68E-16	31 - 83	superfamily	260256
COG1773		Rubredoxin [Energy production and conversion]	-	68.0898	3.41E-16	31 - 86	multi-dom	224687

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263116		Not available	204354	192676	46707	Cre07.g315150.t1.2	AT1G54500.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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