PHATRDRAFT_16725 single-strand binding protein (SSB_OBF)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_16725 chr_28 single-strand binding protein (SSB_OBF) 138872 139216 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0168

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SSB_OBF SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind... cl09930 86.1269 9.77E-23 3 - 110 specific 239942
RPA_2b-aaRSs_OBF_like superfamily Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with... - 86.1269 9.77E-23 3 - 110 superfamily 263924
Ssb Single-stranded DNA-binding protein [DNA replication, recombination, and repair] - 77.1303 9.52E-19 1 - 105 multi-dom 223702

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36438 Not available 269886 167623 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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