PHATRDRAFT_16870 hmdh2_dicdi3-hydroxy-3-methylglutaryl-coenzyme a reductase 2 (hmg-reductase 2) (HMG-CoA_reductase_classI)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16870	chr_29	hmdh2_dicdi3-hydroxy-3-methylglutaryl-coenzyme a reductase 2 (hmg-reductase 2) (HMG-...	281381	282484	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0364

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0116	0.40	900 1500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HMG-CoA_reductase_classI		Class I hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR); Hydroxymethylglutaryl-coenzyme...	cl00205	543.299	0	1 - 362	specific	153081
HMG-CoA_reductase superfamily		Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR); Hydroxymethylglutaryl-coenzyme A (HMG-...	-	543.299	0	1 - 362	superfamily	260259

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33680		Not available	272101	288249	438210	Not available	AT1G76490.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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