PHATRDRAFT_17954 translation initiation factor 5a (PLN03107)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_17954	chr_1	translation initiation factor 5a (PLN03107)	2440833	2441639	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0146

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0228	0.14	760 130000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S1_like superfamily		S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated...	-	65.2512	8.31E-15	86 - 155	superfamily	263921
EFP_N superfamily		Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) KOW-like domain.	-	35.4334	0.000521801	23 - 72	superfamily	254661
PLN03107		eukaryotic translation initiation factor 5A; Provisional	-	259.642	4.27E-89	2 - 158	multi-dom	215580

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40107		Not available	270301	68559	361748	Cre02.g097400.t1.2	AT1G69410.1	285912

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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