PHATRDRAFT_19300 loc446265 protein (RPN2)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19300	chr_5	loc446265 protein (RPN2)	216755	219893	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PC_rep superfamily		Proteasome/cyclosome repeat; Proteasome/cyclosome repeat.	-	35.8953	0.00575431	665 - 699	superfamily	250914
PC_rep superfamily		Proteasome/cyclosome repeat; Proteasome/cyclosome repeat.	-	35.8953	0.00575431	665 - 699	superfamily	250914
RPN2		26S proteasome regulatory complex component [Posttranslational modification, protein turnover,...	-	653.941	0	16 - 1004	multi-dom	227446

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24295		Not available	279188	63417	458270	Cre17.g727950.t1.1	AT1G04810.1	352502

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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