PHATRDRAFT_19518 serine racemase (PRK08198)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_19518 chr_5 serine racemase (PRK08198) 902380 903962 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0404

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0088
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen.... cl00342 321.359 2.25E-106 73 - 382 specific 107205
Trp-synth-beta_II superfamily Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-... - 321.359 2.25E-106 73 - 382 superfamily 260370
ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other... cl09141 78.739 5.42E-18 406 - 473 specific 153158
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 78.739 5.42E-18 406 - 473 superfamily 263730
PRK08198 threonine dehydratase; Provisional - 381.414 2.38E-128 69 - 474 multi-dom 236182

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
14147 Not available 188279 237879 429609 Not available Not available 285157

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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