PHATRDRAFT_1990 rna helicase required for poly(a+) mrna export (DEXDc superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1990 chr_2 rna helicase required for poly(a+) mrna export (DEXDc superfamily) 1238676 1239845 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0002

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 117.339 1.03E-31 263 - 371 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 117.339 1.03E-31 263 - 371 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 201.174 2.26E-62 19 - 222 superfamily 266587
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 122.986 6.56E-33 32 - 231 multi-dom 214692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39864 Not available Not available Not available Not available Cre06.g306850.t1.2 AT3G53110.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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