PHATRDRAFT_20007 lmp7-like protein (proteasome_beta_type_5)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_20007	chr_7	lmp7-like protein (proteasome_beta_type_5)	499423	500468	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
proteasome_beta_type_5		proteasome beta type-5 subunit. The 20S proteasome, multisubunit proteolytic complex, is the...	cl00467	360.792	2.11E-126	75 - 261	specific	239730
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	360.792	2.11E-126	75 - 261	superfamily	260443
PRE1		20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,...	-	199.831	8.81E-63	64 - 277	multi-dom	223711

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262525		Not available	270345	183219	443537	Cre10.g461950.t1.2	AT1G13060.1	285863

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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