PHATRDRAFT_20227 26s proteasome regulatory complex subunit rpn11 (MPN_RPN11_CSN5)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_20227	chr_8	26s proteasome regulatory complex subunit rpn11 (MPN_RPN11_CSN5)	358126	359061	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPN_RPN11_CSN5		Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5;...	cl13996	374.282	5.32E-130	25 - 288	specific	163700
MPN superfamily		Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains...	-	374.282	5.32E-130	25 - 288	superfamily	265414

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33725		Not available	268597	304804	73918	Cre01.g011500.t1.2	AT5G23540.1	563821

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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