PHATRDRAFT_20574 dna excision repair cross-complementing protein (rad25)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20574 chr_9 dna excision repair cross-complementing protein (rad25) 571892 574054 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0031

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 64.9516 2.08E-12 452 - 568 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 64.9516 2.08E-12 452 - 568 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 56.5768 1.59E-09 256 - 392 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 56.5768 1.59E-09 256 - 392 superfamily 266587
Helicase_C_3 superfamily Helicase conserved C-terminal domain; This domain family is found in a wide variety of helicases... - 84.5115 4.46E-19 27 - 133 superfamily 257936
rad25 DNA repair helicase rad25; All proteins in this family for which functions are known are DNA-DNA... - 955.014 0 2 - 716 multi-dom 233046

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33970 Not available 177977 294305 67391 Cre06.g297016.t1.1 AT5G41360.1 563851

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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