PHATRDRAFT_20893 rna pseudouridylate synthase family protein (PseudoU_synth superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20893 chr_10 rna pseudouridylate synthase family protein (PseudoU_synth superfamily) 771680 772753 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S4 S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... cl09940 38.7698 0.000187313 37 - 84 specific 238095
S4 superfamily S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... - 38.7698 0.000187313 37 - 84 superfamily 263930
PseudoU_synth superfamily Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to... - 174.804 2.10E-53 119 - 293 superfamily 260207
PRK10839 16S rRNA pseudouridylate synthase A; Provisional - 63.2032 5.90E-12 38 - 287 multi-dom 236774

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269210 Not available 231643 167574 Not available Not available AT2G39140.1 468526

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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