PHATRDRAFT_21664 abc transporter (3a01205)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_21664 chr_13 abc transporter (3a01205) 727820 732187 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0078

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0057
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCG_PDR_domain2 Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette... cl17201 278.358 2.72E-86 570 - 803 specific 213199
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 172.832 1.55E-48 3 - 235 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 172.832 1.55E-48 3 - 235 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 73.0606 2.26E-14 896 - 1104 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 73.0606 2.26E-14 896 - 1104 superfamily 266576
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 73.0606 2.26E-14 896 - 1104 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 73.0606 2.26E-14 896 - 1104 superfamily 266576
3a01205 Pleiotropic Drug Resistance (PDR) Family protein; [Transport and binding proteins, Other]. - 688.383 0 5 - 1155 multi-dom 233208

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37637 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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