PHATRDRAFT_24922 dna-directed rna polymerase (Zn-ribbon_RPB9)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24922 chr_1 dna-directed rna polymerase (Zn-ribbon_RPB9) 1917866 1918319 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0233

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Zn-ribbon_RPB9 C-terminal zinc ribbon domain of RPB9 subunit of RNA polymerase II; The C-terminal zinc ribbon... cl02609 70.745 2.34E-17 63 - 109 specific 259793
Zn-ribbon superfamily C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit; The... - 70.745 2.34E-17 63 - 109 superfamily 261369
RNA_POL_M_15KD superfamily RNA polymerases M/15 Kd subunit; RNA polymerases M/15 Kd subunit. - 38.1349 1.80E-05 2 - 50 superfamily 261421
RPB9 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription] - 69.4071 2.24E-16 1 - 109 multi-dom 224510

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
39536 Not available 204458 200415 73569 Cre12.g505750.t1.2 AT3G16980.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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