PHATRDRAFT_259 mgc139034 protein (COG1112)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_259 chr_5 mgc139034 protein (COG1112) 465600 468431 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0241

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 41.9392 9.84E-05 392 - 491 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 41.9392 9.84E-05 392 - 491 superfamily 266587
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 119.575 3.19E-30 691 - 883 superfamily 257490
AAA_11 AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 88.8374 7.89E-20 377 - 682 multi-dom 257489
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 135.089 1.04E-32 599 - 890 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262371 Not available 255450 256274 125138 Cre06.g300750.t1.1 AT2G38770.1 250846

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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