PHATRDRAFT_27323 tyrosyl-trna synthetase (PRK05912)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_27323	chr_8	tyrosyl-trna synthetase (PRK05912)	172049	173515	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0134

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0034	0.35	0.0082 2500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TyrRS_core		catalytic core domain of tyrosinyl-tRNA synthetase; Tyrosinyl-tRNA synthetase (TyrRS) catalytic...	cl00015	328.411	1.55E-109	105 - 377	specific	173902
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	328.411	1.55E-109	105 - 377	superfamily	260139
PRK05912		tyrosyl-tRNA synthetase; Validated	-	555.867	0	73 - 486	multi-dom	235645

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
42000		Not available	184961	218392	466998	Cre13.g606050.t1.2	AT3G02660.1	552811

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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