PHATRDRAFT_27508 proteasomealpha type 1 (proteasome_alpha_type_1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_27508 chr_8 proteasomealpha type 1 (proteasome_alpha_type_1) 932484 933509 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0183

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0104
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_alpha_type_1 proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central... cl00467 345.815 2.16E-120 6 - 218 specific 239718
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 345.815 2.16E-120 6 - 218 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 201.757 1.05E-63 4 - 239 multi-dom 223711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
517 Not available 206662 247793 118695 Cre06.g304300.t1.2 AT5G42790.1 541580

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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