PHATRDRAFT_27838 elongation factor 3 (Uup)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_27838 chr_9 elongation factor 3 (Uup) 910135 913376 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0147

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0246
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 104.068 1.83E-25 656 - 960 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 104.068 1.83E-25 656 - 960 superfamily 266551
ABCF_EF-3 ATP-binding cassette domain of elongation factor 3, subfamily F; Elongation factor 3 (EF-3) is a... cl17201 104.068 1.83E-25 656 - 960 specific 213188
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 104.068 1.83E-25 656 - 960 superfamily 266551
Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction... - 328.826 1.52E-100 410 - 973 multi-dom 223562

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262083 Not available 174015 319462 437166 Cre14.g615950.t1.1 Not available 353552

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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