PHATRDRAFT_28684 u4 tri-snrnp-associated 65 kda protein (Peptidase_C19M)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_28684	chr_13	u4 tri-snrnp-associated 65 kda protein (Peptidase_C19M)	455538	457299	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0035

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0090	0.41	0.000000000055 7600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C19M		A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular...	cl02553	496.841	5.21E-173	20 - 470	specific	239134
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	496.841	5.21E-173	20 - 470	superfamily	261337
UCH		Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase.	-	129.836	5.51E-34	139 - 469	multi-dom	249862

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
bd1193		Not available	190972	255329	461221	Cre17.g721600.t1.1	AT4G22285.1	309027

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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