PHATRDRAFT_30003 proteasomebeta type 3 (proteasome_beta_type_3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_30003 chr_20 proteasomebeta type 3 (proteasome_beta_type_3) 111236 111850 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0183

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0125
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
proteasome_beta_type_3 proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the... cl00467 341.145 7.27E-120 6 - 200 specific 239728
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 341.145 7.27E-120 6 - 200 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 130.881 3.20E-37 5 - 197 multi-dom 223711

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
38335 Not available 273592 185537 459379 Cre06.g267500.t1.2 AT1G21720.1 288866

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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