PHATRDRAFT_3052 radical samcfr family (COG0820)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_3052	chr_8	radical samcfr family (COG0820)	139955	141088	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0237

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	52.3357	2.26E-08	123 - 353	superfamily	100105
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	52.3357	2.26E-08	123 - 353	superfamily	100105
COG0820		Predicted Fe-S-cluster redox enzyme [General function prediction only]	-	365.482	2.18E-124	16 - 378	multi-dom	223890

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
15992		Not available	149971	206834	54121	Cre01.g043000.t1.1	AT2G39670.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments