PHATRDRAFT_3183 ac007932_21-aminocyclopropane-1-carboxylate deaminase from pseudomonas gb (Trp-synth-beta_II superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_3183	chr_22	ac007932_21-aminocyclopropane-1-carboxylate deaminase from pseudomonas gb (Trp-synth-beta_II...	229061	230041	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0061	0.31	0.000015 1500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Trp-synth-beta_II superfamily		Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-...	-	273.631	1.68E-89	1 - 321	superfamily	260370

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
27688		Not available	189029	151142	418319	Cre07.g319400.t1.2	AT1G48420.1	309478

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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