PHATRDRAFT_31975 wd-40 repeat family protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31975	chr_1	wd-40 repeat family protein (WD40 superfamily)	1383425	1384807	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0230	0.25	25000 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	60.0412	1.77E-10	163 - 396	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	60.1023	3.71E-10	167 - 335	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24785		Not available	162155	192928	213732	Cre10.g434300.t1.1	AT5G63010.1	348556

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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