PHATRDRAFT_34712 prp3 pre-mrna processing factor 3 homolog (PRP3 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_34712	chr_6	prp3 pre-mrna processing factor 3 homolog (PRP3 superfamily)	201683	203671	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0409

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0251	0.21	10000 89000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRP3 superfamily		pre-mRNA processing factor 3 (PRP3); Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated...	-	128.247	1.37E-33	173 - 463	superfamily	254890
DUF1115 superfamily		Protein of unknown function (DUF1115); This family represents the C-terminus of hypothetical...	-	104.724	2.97E-26	489 - 624	superfamily	253791
DUF1115 superfamily		Protein of unknown function (DUF1115); This family represents the C-terminus of hypothetical...	-	104.724	2.97E-26	489 - 624	superfamily	253791

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9108		Not available	141833	205580	466422	Cre09.g416000.t1.2	AT1G28060.1	321612

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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