PHATRDRAFT_35396 (CHORD superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_35396	chr_7	(CHORD superfamily)	815352	816257	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0138

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0160	0.36	0.0018 3.3

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CHORD superfamily		CHORD; CHORD represents a Zn binding domain. Silencing of the C. elegans CHORD-containing gene...	-	83.8594	7.58E-21	126 - 188	superfamily	252912

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
8417		Not available	272568	216836	Not available	Not available	Not available	534209

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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