PHATRDRAFT_35680 (dna directed) polypeptide g-like (PTZ00162)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_35680	chr_8	(dna directed) polypeptide g-like (PTZ00162)	509177	509722	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0112

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0225	0.20	12 6.8

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S1_like superfamily		S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated...	-	103.88	8.45E-29	85 - 171	superfamily	263921
RNAP_Rpb7_N_like superfamily		RNAP_Rpb7_N_like: This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of...	-	75.6815	2.58E-18	2 - 82	superfamily	262095
PTZ00162		DNA-directed RNA polymerase II subunit 7; Provisional	-	154.862	1.93E-47	1 - 175	multi-dom	240298

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6383		Not available	181715	242590	Not available	Cre16.g667750.t1.2	AT5G59180.1	303395

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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