PHATRDRAFT_36079 tpa: zinc finger protein (RING)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36079	chr_9	tpa: zinc finger protein (RING)	498878	500707	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0235

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RING		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	cl17238	50.522	2.88E-08	275 - 323	specific	238093
RING superfamily		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	-	50.522	2.88E-08	275 - 323	superfamily	266579
zf-UBP		Zn-finger in ubiquitin-hydrolases and other protein; Zn-finger in ubiquitin-hydrolases and other...	cl09957	50.0023	6.17E-08	334 - 386	specific	251121
zf-UBP superfamily		Zn-finger in ubiquitin-hydrolases and other protein; Zn-finger in ubiquitin-hydrolases and other...	-	50.0023	6.17E-08	334 - 386	superfamily	263936

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6178		Not available	Not available	212263	259510	Cre10.g454400.t1.1	AT2G26000.2	470756

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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